Results for 'Roger F. Gibson'

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  1. Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project.Chris F. Taylor, Dawn Field, Susanna-Assunta Sansone, Jan Aerts, Rolf Apweiler, Michael Ashburner, Catherine A. Ball, Pierre-Alain Binz, Molly Bogue, Tim Booth, Alvis Brazma, Ryan R. Brinkman, Adam Michael Clark, Eric W. Deutsch, Oliver Fiehn, Jennifer Fostel, Peter Ghazal, Frank Gibson, Tanya Gray, Graeme Grimes, John M. Hancock, Nigel W. Hardy, Henning Hermjakob, Randall K. Julian, Matthew Kane, Carsten Kettner, Christopher Kinsinger, Eugene Kolker, Martin Kuiper, Nicolas Le Novere, Jim Leebens-Mack, Suzanna E. Lewis, Phillip Lord, Ann-Marie Mallon, Nishanth Marthandan, Hiroshi Masuya, Ruth McNally, Alexander Mehrle, Norman Morrison, Sandra Orchard, John Quackenbush, James M. Reecy, Donald G. Robertson, Philippe Rocca-Serra, Henry Rodriguez, Heiko Rosenfelder, Javier Santoyo-Lopez, Richard H. Scheuermann, Daniel Schober, Barry Smith & Jason Snape - 2008 - Nature Biotechnology 26 (8):889-896.
    Throughout the biological and biomedical sciences there is a growing need for, prescriptive ‘minimum information’ (MI) checklists specifying the key information to include when reporting experimental results are beginning to find favor with experimentalists, analysts, publishers and funders alike. Such checklists aim to ensure that methods, data, analyses and results are described to a level sufficient to support the unambiguous interpretation, sophisticated search, reanalysis and experimental corroboration and reuse of data sets, facilitating the extraction of maximum value from data sets (...)
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  2. The Ontology for Biomedical Investigations.Anita Bandrowski, Ryan Brinkman, Mathias Brochhausen, Matthew H. Brush, Bill Bug, Marcus C. Chibucos, Kevin Clancy, Mélanie Courtot, Dirk Derom, Michel Dumontier, Liju Fan, Jennifer Fostel, Gilberto Fragoso, Frank Gibson, Alejandra Gonzalez-Beltran, Melissa A. Haendel, Yongqun He, Mervi Heiskanen, Tina Hernandez-Boussard, Mark Jensen, Yu Lin, Allyson L. Lister, Phillip Lord, James Malone, Elisabetta Manduchi, Monnie McGee, Norman Morrison, James A. Overton, Helen Parkinson, Bjoern Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Richard H. Scheuermann, Daniel Schober, Barry Smith, Larisa N. Soldatova, Christian J. Stoeckert, Chris F. Taylor, Carlo Torniai, Jessica A. Turner, Randi Vita, Patricia L. Whetzel & Jie Zheng - 2016 - PLoS ONE 11 (4):e0154556.
    The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with precisely defined meanings to describe all aspects of how investigations in the biological and medical domains are conducted. OBI re-uses ontologies that provide a representation of biomedical knowledge from the Open Biological and Biomedical Ontologies (OBO) project and adds the ability to describe how this knowledge was derived. We here describe the state of OBI and several applications that are using it, such as adding semantic expressivity to (...)
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  3. Schleiermacher, Kierkegaard, and the Problem of First Immediacy.Chandler D. Rogers - 2016 - International Journal for Philosophy of Religion 80 (3):259-278.
    Manifold expressions of a particular critique appear throughout Søren Kierkegaard’s pseudonymous corpus: for Kierkegaard and his pseudonyms faith is categorically not a first immediacy, and it is certainly not the first immediate, the annulment of which concludes the first movement of Hegelian philosophy. Kierkegaard’s pseudonyms make it clear that he holds the Hegelian dogmaticians responsible for the promulgation of this misconception, but when Kierkegaard’s journals and papers are consulted another transgressor emerges: the renowned anti-idealist F.D.E. Schleiermacher. I address the extent (...)
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  4. Review of Roger Gottlieb, Joining Hands: Politics and Religion Together for Social Change. [REVIEW]Edmund F. Byrne - 2004 - Teaching Philosophy 27 (1):65-68.
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  5. To Think or Not To Think: The apparent paradox of expert skill in music performance.Andrew Geeves, Doris J. F. McIlwain, John Sutton & Wayne Christensen - 2013 - Educational Philosophy and Theory (6):1-18.
    Expert skill in music performance involves an apparent paradox. On stage, expert musicians are required accurately to retrieve information that has been encoded over hours of practice. Yet they must also remain open to the demands of the ever-changing situational contingencies with which they are faced during performance. To further explore this apparent paradox and the way in which it is negotiated by expert musicians, this article profiles theories presented by Roger Chaffin, Hubert Dreyfus and Tony and Helga Noice. (...)
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  6. Type-q materialism.Pete Mandik & Josh Weisberg - 2008 - In Chase B. Wrenn (ed.), Naturalism, Reference, and Ontology: Essays in Honor of Roger F. Gibson. Peter Lang Publishing Group.
    s Gibson (1982) correctly points out, despite Quine’s brief flirtation with a “mitigated phenomenalism” (Gibson’s phrase) in the late 1940’s and early 1950’s, Quine’s ontology of 1953 (“On Mental Entities”) and beyond left no room for non-physical sensory objects or qualities. Anyone familiar with the contemporary neo-dualist qualia-freak-fest might wonder why Quinean lessons were insufficiently transmitted to the current generation.
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  7. ON GIBSON's DEFENCE OF QUINEAN ETHICS.Olaoluwa Andrew Oyedola & David Oyedola - 2012 - Nigerian Journal of the Humanities 18 (Sepember):18-37..
    Roger Gibson offers a defence of W.V.O. Quine’s conception of ethics as “methodologically infirm” against Owen Flanagan’s criticism. Gibson argues that Flanagan’s critique of Quinean ethics is misdirected, and that he (Flanagan) fails to establish that ethics and science (natural science) are on a methodological par. In this essay, we argue that there may actually be some sort of overemphasis in Flanagan’s argument, given its inclination to see Quine’s holism as rejecting any form of correspondence theory, yet, (...)
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  8. Values in Contexts: An Ontological Theory.Barry Smith - 2014 - In G. John M. Abbarno (ed.), Inherent and Instrumental Values: Excursions in Value Inquiry. Lanham: University Press of America. pp. 17-29.
    Values exist not in isolation, but in complex wholes. Values are what they are because of the complex wholes in which they are situated. To do justice to this thesis will require a holistic ontology, a theory according to which many types of entities exist only as inseparable parts or moments of wider contexts or environments. An ontological theory of environments -- with roots in Gestalt psychology and the ecological psychology of J. J. Gibson and Roger Barker, and (...)
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  9. Husserlian Ecology.Barry Smith - 2001 - Human Ontology (Kyoto) 7:9-24.
    If mind is a creature of adaptation, then our standard theories of intentionality and of mental representation are in need of considerable revision. For such theories, deriving under Cartesian inspiration from the work of Brentano, Husserl and their followers, are context-free. They conceive the subject of mental experience in isolation from any surrounding physico-biological environment. Husserl sought in his later writings to find room for the surrounding world of human practical experience, and a similar expansion of concerns can be detected (...)
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  10. Les objects sociaux.Barry Smith - 2002 - Philosophique 26 (2):315–347.
    One reason for the renewed interest in Austrian philosophy, and especially in the work of Brentano and his followers, turns on the fact that analytic philosophers have become once again interested in the traditional problems of metaphysics. It was Brentano, Husserl, and the philosophers and psychologists whom they influenced, who drew attention to the thorny problem of intentionality, the problem of giving an account of the relation between acts and objects or, more generally, between the psychological environments of cognitive subjects (...)
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  11. Les objets sociaux.Barry Smith - 1999 - Philosophiques 26 (2):315-347.
    One reason for the renewed interest in Austrian philosophy, and especially in the work of Brentano and his followers, turns on the fact that analytic philosophers have become once again interested in the traditional problems of metaphysics. It was Brentano, Husserl, and the philosophers and psychologists whom they influenced, who drew attention to the thorny problem of intentionality, the problem of giving an account of the relation between acts and objects or, more generally, between the psychological environments of cognitive subjects (...)
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  12. Quine's Naturalism and Behaviorisms.Tony Cheng - 2018 - Metaphilosophy 49 (4):548-567.
    This paper investigates the complicated relations between various versions of naturalism, behaviorism, and mentalism within the framework of W. V. O. Quine's thinking. It begins with Roger Gibson's reconstruction of Quine's behaviorisms and argues that it lacks a crucial ontological element and misconstrues the relation between philosophy and science. After getting clear of Quine's naturalism, the paper distinguishes between evidential, methodological, and ontological behaviorisms. The evidential and methodological versions are often conflated, but they need to be clearly distinguished (...)
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  13. Social Objects.Barry Smith - 1999 - Philosophiques 26 (2):315-347.
    One reason for the renewed interest in Austrian philosophy, and especially in the work of Brentano and his followers, turns on the fact that analytic philosophers have become once again interested in the traditional problems of metaphysics. It was Brentano, Husserl, and the philosophers and psychologists whom they influenced, who drew attention to the thorny problem of intentionality, the problem of giving an account of the relation between acts and objects or, more generally, between the psychological environments of cognitive subjects (...)
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  14. The Cambridge Companion to Quine (Review). [REVIEW]Andrew Lugg - 2004 - Philosophy in Review 24 (5):325-328.
    Review of Roger Gibson, ed., The Cambridge Companion to Quine.
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  15. Objects and their environments: From Aristotle to ecological ontology.Barry Smith - 2001 - In Andrew U. Frank, Jonathan Raper & Jean-Paul Cheylan (eds.), The Life and Motion of Socio-Economic Units. London: Taylor & Francis. pp. 79-97.
    What follows is a contribution to the theory of space and of spatial objects. It takes as its starting point the philosophical subfield of ontology, which can be defined as the science of what is: of the various types and categories of objects and relations in all realms of being. More specifically, it begins with ideas set forth by Aristotle in his Categories and Metaphysics, two works which constitute the first great contributions to ontological science. Because Aristotle’s ontological ideas were (...)
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  16. Theories of Consciousness & Death.Gregory Nixon (ed.) - 2016 - New York, USA: QuantumDream.
    What happens to the inner light of consciousness with the death of the individual body and brain? Reductive materialism assumes it simply fades to black. Others think of consciousness as indicating a continuation of self, a transformation, an awakening or even alternatives based on the quality of life experience. In this issue, speculation drawn from theoretic research are presented. -/- Table of Contents Epigraph: From “The Immortal”, Jorge Luis Borges iii Editor’s Introduction: I Killed a Squirrel the Other Day, Gregory (...)
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  17. Transporte de Gametas, Fertilização e Segmentação.Emanuel Isaque Cordeiro da Silva - manuscript
    TRANSPORTE DE GAMETAS, FERTILIZAÇÃO E SEGMENTAÇÃO -/- • _____OBJETIVO -/- O entendimento do desenvolvimento embrionário nos estágios iniciais, desde a deposição dos espermatozoides na fêmea, passando pela fertilização deste no ovócito e na formação do zigoto, é de suma importância para diferenciar especialistas em reprodução e manejo reprodutivo no mercado de trabalho e, também, durante a vida acadêmica. Compreender os processos que levam à formação do zigoto na fêmea é essencial para avaliar a capacidade reprodutiva dos animais e, mediante técnicas, (...)
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  18. Panorama Histórico dos Problemas Filosóficos.Emanuel Isaque Cordeiro da Silva - manuscript
    Antes de entrar cuidadosamente no estudo de cada filósofo, em suas respectivas ordens cronológicas, é necessário dar um panorama geral sobre eles, permitindo, de relance, a localização deles em tempos históricos e a associação de seus nomes com sua teoria ou tema central. l. OS FILÓSOFOS PRÉ-SOCRÁTICOS - No sétimo século antes de Jesus Cristo, nasce o primeiro filósofo grego: Tales de Mileto2 . Ele e os seguintes filósofos jônicos (Anaximandro: Ἀναξίμανδρος: 3 610-546 a.C.) e Anaxímenes: (Άναξιμένης: 586-524 a.C.) tentaram (...)
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  19. On the Analogy between Artworks and Selves.John Gibson - 2024 - East Asian Journal of Philosophy 3 (2):1-13.
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  20.  90
    Poetic Difficulty & Epistemic Authority.John Gibson - 2024 - Poema. Jahrbuch Für Lyrikforschung 2:123-136.
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  21. Literature and Knowledge.John Gibson - 2009 - In Richard Thomas Eldridge (ed.), The Oxford handbook of philosophy and literature. New York: Oxford University Press.
    What is the relation between works of fiction and the acquisition of knowledge?
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  22. Painterly Aspirations in Poety.John Gibson - 2022 - In Noël Carroll & Jonathan Gilmore (eds.), The Routledge Companion to the Philosophies of Painting and Sculpture. Routledge. pp. 247-56.
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  23. Between truth and triviality.John Gibson - 2003 - British Journal of Aesthetics 43 (3):224-237.
    A viable theory of literary humanism must do justice to the idea that literature offers cognitive rewards to the careful reader. There are, however, powerful arguments to the effect that literature is at best only capable of offering idle visions of a world already well known. In this essay I argue that there is a form of cognitive awareness left unmentioned in the traditional vocabulary of knowledge acquisition, a form of awareness literature is particularly capable of offering. Thus even if (...)
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  24. What Makes a Poem Philosophical?John Gibson - 2017 - In Zumhagen-Yekplé Karen & LeMahieu Michael (eds.), Wittgenstein and Modernism. Chicago: University of Chicago Press. pp. 130-152.
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  25. Empathy.John Gibson - 2015 - In Noël Carroll & John Gibson (eds.), The Routledge Companion to Philosophy of Literature. New York: Routledge. pp. 200-219.
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  26. Are Credences Different From Beliefs?Roger Clarke & Julia Staffel - 2024 - In Blake Roeber, Ernest Sosa, Matthias Steup & John Turri (eds.), Contemporary Debates in Epistemology, 3rd edition. Wiley-Blackwell.
    This is a three-part exchange on the relationship between belief and credence. It begins with an opening essay by Roger Clarke that argues for the claim that the notion of credence generalizes the notion of belief. Julia Staffel argues in her reply that we need to distinguish between mental states and models representing them, and that this helps us explain what it could mean that belief is a special case of credence. Roger Clarke's final essay reflects on the (...)
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  27. Anselm on Freedom and Grace.James A. Gibson - 2014 - Oxford Studies in Philosophy of Religion 5:88-121.
    The chapter presents Anselm’s incompatibilist account of human freedom within the context of his theodicy and presents two arguments against his account. Both arguments aim to show there is a genuine conflict between his account of freedom and the role of God’s grace in making agents just. The first argument, the problem of harmonization, highlights the conflict within the soteriological context where an agent changes from being unjust to being just. The second argument, the problem of just creation, highlights the (...)
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  28. Thick Narratives.John Gibson - 2011 - In John Gibson & Noel Carroll (eds.), Narrative, Emotion, and Insight. Penn State University Press. pp. 69.
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  29. The Question of Poetic Meaning.John Gibson - 2011 - Nonsite (4).
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  30. Cognitivism and the arts.John Gibson - 2008 - Philosophy Compass 3 (4):573-589.
    Cognitivism in respect to the arts refers to a constellation of positions that share in common the idea that artworks often bear, in addition to aesthetic value, a significant kind of cognitive value. In this paper I concentrate on three things: (i) the challenge of understanding exactly what one must do if one wishes to defend a cognitivist view of the arts; (ii) common anti-cognitivist arguments; and (iii) promising recent attempts to defend cognitivism.
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  31. Sextus Empiricus on Isotheneia_ and _Epoche: A Developmental Model.Roger Eichorn - 2020 - Sképsis: Revista de Filosofia 21 (11):188-209.
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  32. Explaining the behaviour of random ecological networks: the stability of the microbiome as a case of integrative pluralism.Roger Deulofeu, Javier Suárez & Alberto Pérez-Cervera - 2019 - Synthese 198 (3):2003-2025.
    Explaining the behaviour of ecosystems is one of the key challenges for the biological sciences. Since 2000, new-mechanicism has been the main model to account for the nature of scientific explanation in biology. The universality of the new-mechanist view in biology has been however put into question due to the existence of explanations that account for some biological phenomena in terms of their mathematical properties (mathematical explanations). Supporters of mathematical explanation have argued that the explanation of the behaviour of ecosystems (...)
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  33. Selves on Selves: The Philosophical Significance of Autobiography.John Gibson - 2012 - Journal of Aesthetic Education 46 (4):109-119.
    Philosophers of literature do not take much of an interest in autobiography.1 In one sense this is not surprising. As a certain prejudice has it, autobiography is, along with biography, the preferred reading of people who do not really like to read. The very words can conjure up images of what one finds on bookshelves in Florida retirement communities and in underfunded public libraries, books with titles like Under the Rainbow: The Real Liza Minnelli or Me: Stories of My Life (...)
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  34. Effective Justice.Roger Crisp & Theron Pummer - 2020 - Journal of Moral Philosophy 17 (4):398-415.
    Effective Altruism is a social movement which encourages people to do as much good as they can when helping others, given limited money, time, effort, and other resources. This paper first identifies a minimal philosophical view that underpins this movement, and then argues that there is an analogous minimal philosophical view which might underpin Effective Justice, a possible social movement that would encourage promoting justice most effectively, given limited resources. The latter minimal view reflects an insight about justice, and our (...)
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  35. Narrative and the Literary Imagination.John Gibson - 2014 - In Allen Speight (ed.), Narrative, Philosophy & Life. Springer. pp. 135-50.
    This paper attempts to reconcile two apparently opposed ways of thinking about the imagination and its relationship to literature, one which casts it as essentially concerned with fiction-making and the other with culture-making. The literary imagination’s power to create fictions is what gives it its most obvious claim to “autonomy”, as Kant would have it: its freedom to venture out in often wild and spectacular excess of reality. The argument of this paper is that we can locate the literary imagination’s (...)
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  36. Interpretation, Literature and Meaning Skepticism.John Gibson - 2016 - In Dirk-Martin Grube (ed.), Meaning and Interpretation. Brill.
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  37. Understanding the abortion argument.Roger Wertheimer - 1971 - Philosophy and Public Affairs 1 (1):67-95.
    critical analyses of the arguments and attitudes favoring the various popular datings of the inception of a human being's life.
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  38. Assertion, Belief, and Context.Roger Clarke - 2018 - Synthese 195 (11):4951-4977.
    This paper argues for a treatment of belief as essentially sensitive to certain features of context. The first part gives an argument that we must take belief to be context-sensitive in the same way that assertion is, if we are to preserve appealing principles tying belief to sincere assertion. In particular, whether an agent counts as believing that p in a context depends on the space of alternative possibilities the agent is considering in that context. One and the same doxastic (...)
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  39. Skepticism and the Idea of an Other.John Gibson & Simona Bertacco - 2011 - In Bernie Rhei (ed.), Stanley Cavell and Literary Theory: Consequences of Skepticism. Continuum.
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  40. On (Not) Making Oneself Known.John Gibson - 2018 - In Tzachi Zamir (ed.), Shakespeare's Hamlet: Philosophical Perspectives. Oup Usa. pp. 17-45.
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  41. What Do Humanists Want?John Gibson - 2014 - In Patricia Hanna (ed.), Reality and Culture: Essays on the Philosophy of Bernard Harrison. Editions Rodopi.
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  42.  91
    Matt Brim (2020), Poor Queer Studies: Confronting Elitism in the University. [REVIEW]Andrew G. Gibson - 2023 - Latiss 16 (1):119-121.
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  43. Dialectical Pyrrhonism: Montaigne, Sextus Empiricus, and the Self-Overcoming of Philosophy.Roger Eichorn - 2022 - Sképsis: Revista de Filosofia 24 (13):24-46.
    In her book Michel de Montaigne: Accidental Philosopher, Ann Hartle argues that Montaigne’s thought is dialectical in the Hegelian sense. Unlike Hegel’s progressive dialectic, however, Montaigne’s thought is, according to Hartle, circular in that the reconciliation of opposed terms comes not in the form of a newly emergent term, but in a return to the first term, where the meaning of the first is transformed as a result of its dialectical interaction with the second. This analysis motivates Hartle’s claim that (...)
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  44. Against Theistic Personalism: What Modern Epistemology does to Classical Theism.Roger Pouivet - 2018 - European Journal for Philosophy of Religion 10 (1):1-19.
    Is God a person, like you and me eventually, but only much better and without our human deficiencies? When you read some of the philosophers of religion, including Richard Swinburne, Alvin Plantinga, or Open Theists, God appears as such a person, in a sense closer to Superman than to the Creator of Heaven and Earth. It is also a theory that a Christian pastoral theology today tends to impose, insisting that God is close to us and attentive to all of (...)
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  45. Interpreting words, interpreting worlds.John Gibson - 2006 - Journal of Aesthetics and Art Criticism 64 (4):439–450.
    It is often assumed that literary meaning is essentially linguistic in nature and that literary interpretation is therefore a purely linguistic affair. This essay identifies a variety of literary meaning that cannot be reduced to linguistic meaning. Meaning of this sort is generated not by a communicative act so much as through a creative one: the construction of a fictional world. The way in which a fictional world can bear meaning turns out to be strikingly unlike the way a sentence (...)
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  46. Zombie Philosophy.John Gibson - 2014 - In Edward P. Comentale & Aaron Jaffe (eds.), The Year's Work at the Zombie Research Center. pp. 416-436.
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  47. Making Sense of Thompson Clarke's "The Legacy of Skepticism".Roger Eichorn - 2021 - Sképsis: Revista de Filosofia 23 (12):70-102.
    Thompson Clarke’s seminal paper “The Legacy of Skepticism” (1972) is notoriously difficult in both substance and presentation. Despite the paper’s importance to skepticism studies in the nearly half-century since its publication, no attempt has been made in the secondary literature to provide an account, based on a close reading of the text, of just what Clarke’s argument is. Furthermore, much of the existing literature betrays (or so it seems to me) fundamental misunderstandings of Clarke’s thought. In this essay, I attempt (...)
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  48. Reverence for Life and Ecological Conversion.Chandler D. Rogers - 2023 - Worldviews: Global Religions, Culture, and Ecology 27 (3):261-283.
    Friedrich Nietzsche and Albert Schweitzer end up defending radically similar, yet critically opposed conclusions about the human animal and its place in nature, particularly with regard to the ethical awareness that does or does not follow from this situatedness. Arthur Schopenhauer’s notion of the will accounts for their similar foundational assumptions. But what accounts for the fact that their shared desire to affirm the will to life leads to fundamentally opposed ethical conclusions? What keeps Schweitzer’s ascetic ethic of reverence for (...)
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  49. Lyric Self-Expression.Hannah H. Kim & John Gibson - 2021 - In Sonia Sedivy (ed.), Art, Representation, and Make-Believe: Essays on the Philosophy of Kendall L. Walton. New York: Routledge.
    Philosophers ask just whose expression, if anyone’s, we hear in lyric poetry. Walton provides a novel possibility: it’s the reader who “uses” the poem (just as a speech giver uses a speech) who makes the language expressive. But worries arise once we consider poems in particular social or political settings, those which require a strong self-other distinction, or those with expressions that should not be disassociated from the subjects whose experience they draw from. One way to meet this challenge is (...)
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  50.  50
    The Zombie Sublime.John Gibson - forthcoming - In E. Comentale & A. Jaffe (eds.), The Year's Work in Zombie Studies. Indiana University Press.
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